Baranzini Lab UCSF

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1. biorouter biorouter Public

   Foundational AI Platform for Biomedical Research Allowing Agents built by the Community

   Rust 12 1

2. MedCP MedCP Public

   An MCP server that integrates electronic health record databases and a large-scale heterogeneous knowledge graph for rapid clinical record query and fast biomedical knowledge inference.

   Python 4

3. tkoi tkoi Public

   Transcriptomic Knowledge-Graph Omics Integration for Human Pathway Analysis

   R 2

4. KG_RAG KG_RAG Public

   Empower Large Language Models (LLM) using Knowledge Graph based Retrieval-Augmented Generation (KG-RAG) for knowledge intensive tasks

   Jupyter Notebook 947 115

5. spoke_genelab spoke_genelab Public

   Jupyter Notebook 11 6

6. SPOKEsigs SPOKEsigs Public

   Jupyter Notebook 2 1