Skip to content
@Breeding-Insight

Breeding Insight

Combining genomics and informatics to accelerate genetic gains.

Pinned Loading

  1. bi-web bi-web Public

    TypeScript 7 2

  2. bi-api bi-api Public

    Java 8 2

  3. brapi brapi Public

    A java project with modules to interact with BrAPI data.

    Java 4 1

  4. bi-docker-stack bi-docker-stack Public

    Shell 3 1

Repositories

Showing 10 of 78 repositories
  • SoftwareHub Public
    Breeding-Insight/SoftwareHub's past year of commit activity
    SCSS 1 1 0 0 Updated Nov 4, 2026
  • brapi-Java-ProdServer Public Forked from plantbreeding/brapi-Java-ProdServer

    BrAPI Java Production Server

    Breeding-Insight/brapi-Java-ProdServer's past year of commit activity
    Java 0 MIT 9 0 2 Updated Nov 4, 2026
  • Qploidy2 Public Forked from Cristianetaniguti/Qploidy

    Estimates ploidy, aneuploidy and large-scale CNV based on genetic markers

    Breeding-Insight/Qploidy2's past year of commit activity
    R 3 AGPL-3.0 2 0 1 Updated Nov 4, 2026
  • fieldbook2deltabreed Public
    Breeding-Insight/fieldbook2deltabreed's past year of commit activity
    R 0 0 0 1 Updated Nov 3, 2026
  • bi-api Public
    Breeding-Insight/bi-api's past year of commit activity
    Java 8 Apache-2.0 2 0 20 Updated Nov 3, 2026
  • HapSearch Public
    Breeding-Insight/HapSearch's past year of commit activity
    Python 0 2 0 0 Updated Nov 3, 2026
  • MADCATS Public

    Command-line tool that turns targeted-sequencing FASTQs into MADC tables of microhaplotypes and their read counts, counting each panel’s designed alleles and discovering new ones.

    Breeding-Insight/MADCATS's past year of commit activity
    Python 0 GPL-3.0 0 0 1 Updated Nov 2, 2026
  • BIGapp Public

    The BIG app is a user-friendly R Shiny app to analyze genomic data without needing to use command-line tools and works across different species ploidy.

    Breeding-Insight/BIGapp's past year of commit activity
    R 9 Apache-2.0 8 2 0 Updated Nov 1, 2026
  • nemaquant Public
    Breeding-Insight/nemaquant's past year of commit activity
    JavaScript 0 Apache-2.0 0 0 0 Updated Oct 30, 2026
  • brapi Public

    A java project with modules to interact with BrAPI data.

    Breeding-Insight/brapi's past year of commit activity
    Java 4 Apache-2.0 1 2 6 Updated Oct 29, 2026
View all repositories