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@CompOmics

Computational Omics and Systems Biology Group

The CompOmics group, headed by Prof. Dr. Lennart Martens, specializes in the management, analysis and integration of high-throughput Omics data.

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  1. ThermoRawFileParser ThermoRawFileParser Public

    Thermo RAW file parser that runs on Linux/Mac and all other platforms that support Mono

    C# 254 59

  2. DeepLC DeepLC Public

    DeepLC: Retention time prediction for peptides carrying any modification.

    Python 81 26

  3. ms2rescore ms2rescore Public

    Modular and user-friendly platform for AI-assisted rescoring of peptide identifications

    Python 67 23

  4. lesSDRF lesSDRF Public

    Spending less time on SDRF creates more time for amazing research

    Jupyter Notebook 10 8

Repositories

Showing 10 of 121 repositories
  • MuMDIA Public

    MuMDIA a data-independent-acquisition (DIA) proteomics search engine.

    CompOmics/MuMDIA's past year of commit activity
    Rust 5 Apache-2.0 1 2 2 Updated Nov 11, 2026
  • visDIA Public

    Interactive, read-only viewer for MuMDIA DIA proteomics results

    CompOmics/visDIA's past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Nov 6, 2026
  • lesSDRF Public

    Spending less time on SDRF creates more time for amazing research

    CompOmics/lesSDRF's past year of commit activity
    Jupyter Notebook 10 Apache-2.0 8 3 1 Updated Nov 6, 2026
  • mumble Public

    Finding the perfect modification for your mass shift

    CompOmics/mumble's past year of commit activity
    Python 6 Apache-2.0 1 0 0 Updated Nov 5, 2026
  • lsabd-machine-learning-tutorials Public

    Tutorials machine learning for the Large Scale Analysis of Biomedical Data course

    CompOmics/lsabd-machine-learning-tutorials's past year of commit activity
    Jupyter Notebook 0 CC-BY-4.0 1 0 0 Updated Nov 4, 2026
  • IM2Deep Public

    Collisional cross-section prediction for modified and multiconformational peptides

    CompOmics/IM2Deep's past year of commit activity
    Python 15 Apache-2.0 2 0 2 Updated Nov 1, 2026
  • oui-discovery Public

    Collaboration between CompOmics & OpenProt group

    CompOmics/oui-discovery's past year of commit activity
    Jupyter Notebook 0 Apache-2.0 0 0 0 Updated Nov 1, 2026
  • ThermoRawFileParser Public

    Thermo RAW file parser that runs on Linux/Mac and all other platforms that support Mono

    CompOmics/ThermoRawFileParser's past year of commit activity
    C# 254 Apache-2.0 59 15 0 Updated Oct 30, 2026
  • ML_AI_Analytical_Chemistry_Course Public
    CompOmics/ML_AI_Analytical_Chemistry_Course's past year of commit activity
    Jupyter Notebook 2 Apache-2.0 0 0 0 Updated Oct 30, 2026
  • textmining Public
    CompOmics/textmining's past year of commit activity
    Jupyter Notebook 0 Apache-2.0 0 0 0 Updated Oct 26, 2026
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