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chore(deps): bump the python-dependencies group across 1 directory with 8 updates - #17

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Bumps the python-dependencies group with 8 updates in the / directory:

Package From To
numpy 2.5.3 2.5.4
pandas 3.0.6 3.1.0
pyarrow 25.0.1 26.0.0
pytest 9.1.1 9.2.0
mypy 2.4.0 2.4.1
ruff 0.16.10 0.17.3
ty 0.0.84 0.0.95
pandas-stubs 3.0.5.260914 3.1.0.261029

Updates numpy from 2.5.3 to 2.5.4

Release notes

Sourced from numpy's releases.

v2.5.4 (Oct 10, 2026)

NumPy 2.5.4 Release Notes

Released on 2026-10-10.

NumPy 2.5.4 is a patch release that fixes bugs discovered after the 2.5.3 release. Highlights are:

  • Many typing fixes and improvements,
  • A workaround for the MSVC 19.51 bug, see below.

This release supports Python versions 3.12-3.15.

Improvements

  • numpy.linalg.svd and numpy.linalg.lstsq now raise for inputs containing infinities instead of returning garbage results.

  • Fixed hangs in numpy.linalg.svd and numpy.linalg.lstsq for certain inputs containing infinities for recent versions of some LAPACK implementations.

  • numpy.linalg.cond now handles non-finite inputs more consistently.

(gh-32593)

StringDType hashing with NaN sentinels

StringDType instances with equivalent floating-point NaN sentinels now have equal hashes. Previously, distinct NaN objects could produce equal dtype instances with different hashes, causing dictionary lookups and set deduplication to fail.

(gh-32563)

Changes

MaskedArray resets a fill_value that cannot be represented in a new dtype

A fill_value copied from a source array is now reset to the default fill_value for the new dtype when it cannot be represented in that dtype. Previously the copied value could be stale: ufuncs that change dtype left the result holding a fill_value typed for the old dtype, which raised a TypeError only when something later validated it (such as .view()), and a floating point fill_value that overflows an integer dtype was kept as an out-of-range value together with a RuntimeWarning. Both now fall back to the default, including when a masked array is passed to MaskedArray with a different dtype. A fill_value given explicitly by the user is still validated and raises as before. This can now raise a ComplexWarning if the fill_value is complex and the new dtype is real.

... (truncated)

Commits
  • a3d0ef1 Merge pull request #32969 from charris/prepare-2.5.4
  • 087b536 MAINT: Make OpenBLAS version check use 2.5.x branch.
  • 91acd87 REL: Prepare for the NumPy 2.5.4 release.
  • 9cc555b Merge pull request #32956 from charris/backport-typing-1
  • e04b972 TYP: dtype[void].names: allow setting with list (#32943)
  • d929969 TYP: timedelta64: datetime.timedelta construction isn't deprecated (#...
  • 839467f TYP: ma.getmaskarray: accept array-likes (#32934)
  • 64b721b TYP: polynomial: accept scalar coef in the poly constructors (#32931)
  • 06b7ad2 TYP: void: accept any dtype: str in constructor calls (#32928)
  • c7bcd2c TYP: place: widen mask (#32926)
  • Additional commits viewable in compare view

Updates pandas from 3.0.6 to 3.1.0

Release notes

Sourced from pandas's releases.

pandas 3.1.0

We are pleased to announce the release of pandas 3.1.0. This release includes some new features, bug fixes, and performance improvements. We recommend that all users upgrade to this version.

Highlights include:

See the detailed release notes for a list of all the changes.

The release can be installed from PyPI:

python -m pip install --upgrade pandas

Or from conda-forge

conda install -c conda-forge pandas

Please report any issues with the release on the pandas issue tracker.

Thanks to all the contributors who made this release possible.

pandas 3.1.0rc0

We are pleased to announce a release candidate for pandas 3.1.0.

See the whatsnew for a list of all the changes.

The release can be installed from PyPI:

python -m pip install --upgrade --pre pandas==3.1.0rc0

Or from conda-forge

conda install -c conda-forge/label/pandas_rc pandas==3.1.0rc0

Please report any issues with the release candidate on the pandas issue tracker.

Thanks to all the contributors who made this release possible.

Commits
  • c6f4676 RLS: 3.1.0
  • dd69475 Backport PR #71468 on branch 3.1.x (DOC: 3.1 whatsnew: add some structure to ...
  • 4ccc19a Backport PR #71465 on branch 3.1.x (DOC: update announce (contributor listing...
  • 24dae63 [backport 3.1.x] DOC: cleanup 3.1.0 whatsnew (#71408) (#71466)
  • 8519ca6 [backport 3.1.x] CI: temporary pin dateutil to <3 (#71461) (#71464)
  • 2126193 Backport PR #71387 on branch 3.1.x (BUG: fix string regex operations with $ e...
  • 4700f5d Backport PR #71442 on branch 3.1.x (BUG: parallel read_csv raising released m...
  • 08efb14 Backport PR #71456 on branch 3.1.x (TST: Fix test_reduce_array until reduct...
  • ee8dcb7 Backport PR #71429 on branch 3.1.x (DOC: add dedicated 3.1 whatsnew section f...
  • d93e32c Backport PR #71383 on branch 3.1.x (BUG: fix string regex operations with Pyt...
  • Additional commits viewable in compare view

Updates pyarrow from 25.0.1 to 26.0.0

Release notes

Sourced from pyarrow's releases.

Apache Arrow 26.0.0

Release Notes URL: https://arrow.apache.org/release/26.0.0.html

Apache Arrow 26.0.0 RC0

Release Notes: Release Candidate: 26.0.0 RC0

Commits
  • 4461671 MINOR: [Release] Update versions for 26.0.0
  • 9d03a26 MINOR: [Release] Update .deb/.rpm changelogs for 26.0.0
  • 5ce3c95 MINOR: [Release] Update CHANGELOG.md for 26.0.0
  • 28e6c67 GH-51687: [C++] Skipt tests that require threads if ARROW_ENABLE_THREADING=OF...
  • 12409f8 GH-51682: [CI][C++] Add liburiparser-dev to system dependency image (#51683)
  • 1deceed GH-51675: [Python][Packaging] Apply upstream fix to UriParser from vcpkg and ...
  • cca44b5 GH-51638: [CI][C++][Parquet] Update expected JSON output in parquet-reader-te...
  • 5183e21 GH-46901: [C++][Compute] Add remainder and modulo kernels (#48914)
  • f0d043c MINOR: [Docs][C++] Fix doxygenfile path for arrow/flight/transport.h (#51677)
  • 17be9c7 GH-51652: [Python] Add NumPy StringDType to Arrow conversion (#51157)
  • Additional commits viewable in compare view

Updates pytest from 9.1.1 to 9.2.0

Release notes

Sourced from pytest's releases.

9.2.0

pytest 9.2.0 (2026-10-27)

Removals and backward incompatible breaking changes

  • #14716: -c now raises a usage error for a path that does not exist, is a directory, or is in a format pytest has no loader for. Such paths were previously either ignored or reported as an unhandled FileNotFoundError.

  • #8593: The indirect, ids and scope arguments of Metafunc.parametrize() <pytest.Metafunc.parametrize> -- and therefore of @pytest.mark.parametrize <pytest.mark.parametrize ref> -- are now keyword-only.

    Passing them positionally was a common source of confusing errors, e.g. parametrize("arg1", "arg2", [(1, 2)]) made the argvalues land in indirect and failed with indirect fixture '(1, 2)' doesn't exist; such mistakes now fail with an understandable TypeError. The type annotations have always declared these arguments as keyword-only.

  • #993: Plugin import failures at startup are now reported and classified instead of escaping as a raw traceback with the accidental exit code 1:

    • a plugin that cannot be found -- via -p, pytest_plugins or PYTEST_PLUGINS -- exits with pytest.ExitCode USAGE_ERROR (4), like a conftest.py that fails to import;
    • a plugin that is found but raises while importing -- including a broken pytest11 entry point or a missing plugin dependency -- exits with pytest.ExitCode INTERNAL_ERROR (3), with the traceback preserved.

    pytest.main now returns these codes instead of raising ImportError. Also fixed an IndexError from pytest's own internals when the plugin raised an exception with no arguments.

Deprecations (removal in next major release)

  • #14742: The private _pytest.python.CallSpec2 name has been renamed to CallSpec. The old CallSpec2 alias remains available for now and will be removed in pytest 10 or 11.

  • #14755: Schedule yield_fixture decorator for removal in pytest 10 or 11.

  • #14774: Similarly to the deprecation of class-scoped fixtures defined as instance methods in pytest 9.1, all higher-scoped fixtures (module, package, and session) defined as instance methods are now deprecated.

    They suffer from the same issue the original deprecation only fixed for class-scoped fixtures, see 10819 and 14011.

  • #14808: Passing a non-string value to a string-typed ini option now emits a pytest.PytestRemovedIn10Warning. This affects [tool.pytest.ini_options] in pyproject.toml. In pytest 10 this will raise a TypeError, matching the behavior of the corresponding TOML config path.

  • #7323: Passing bytes to TerminalReporter.write_line() is now deprecated, pass a str instead.

New features

  • #14743: Full diff: now contains a legend explaining the + & - symbols in diff output.
  • #2781: When strict_markers is enabled, marker names used in -m expressions are now validated against registered markers.
  • #6881: Added the parametrize_long_str_id_strategy configuration option to control how long str/bytes parameter values are handled in auto-generated test IDs. Explicit IDs set via ids=[...] or pytest.param(..., id=...) are not affected. Available strategies: short (default, values over 100 chars fall back to argname+index), sha256 (SHA-256 hex digest), legacy (keep full value), and disallow (error requesting explicit IDs).

Improvements in existing functionality

  • #10745: A RecursionError whose recursion origin cannot be located now shows only the first and last 10 stack frames, matching what pytest already did when locating the origin failed outright. Previously the full traceback -- often around a thousand near-identical frames -- was rendered, which was both slow and unreadable. Pass --full-trace to see every frame.

... (truncated)

Commits
  • ae1d0ff Prepare release version 9.2.0
  • 143ce31 pre-commit: exclude codespell on generated release announcements
  • 532dc5f tox: add attrs dependency to regen, needed in reportingdemo.rst
  • a7b2446 Merge pull request #15245 from pytest-dev/claude/project-thread-9jcf91
  • 679d09c [pre-commit.ci] pre-commit autoupdate (#15266)
  • 41d12cd docs: clarify typing for yield fixtures
  • b9022ba Merge pull request #15182 from 1871698/docs/improve-getting-started-description
  • 16f87a7 docs: improve getting-started.rst test execution description
  • 082ed70 Merge pull request #15255 from pytest-dev/claude/project-thread-eoi3d6
  • ae37a01 Merge pull request #15227 from pytest-dev/claude/project-thread-4etye4
  • Additional commits viewable in compare view

Updates mypy from 2.4.0 to 2.4.1

Changelog

Sourced from mypy's changelog.

Mypy 2.4.1

  • Process overloads as a whole in two-phase type checking (Ivan Levkivskyi, PR 22231)
  • Skip recursive setup for frame-private nested functions in mypyc (Piotr Sawicki, PR 22187)

Acknowledgements

Thanks to all mypy contributors who contributed to this release:

  • A5rocks
  • Adam Dangoor
  • Alex Waygood
  • Ali Hamdan
  • Brian Helba
  • Chad Dombrova
  • David Foster
  • dnwpark
  • Edgar Ramírez Mondragón
  • Giorgos Michas
  • Ivan Levkivskyi
  • Jelle Zijlstra
  • Jukka Lehtosalo
  • Marc Mueller
  • Michael R. Crusoe
  • NIYONSHUTI Emmanuel
  • Piotr Sawicki
  • Shantanu
  • themylogin
  • Vaggelis Danias
  • Willy Bruns

I'd also like to thank my employer, Dropbox, for supporting mypy development.

Mypy 2.3

We've just uploaded mypy 2.3.0 to the Python Package Index (PyPI). Mypy is a static type checker for Python. This release includes new features, performance improvements and bug fixes. You can install it as follows:

python3 -m pip install -U mypy

You can read the full documentation for this release on Read the Docs.

The Upcoming Switch to the New Native Parser

We are planning to enable the new native parser (--native-parser) by default soon. We recommend that you test the native parser in your projects and report any issues in the mypy issue tracker.

Mypyc Free-threading Memory Safety

... (truncated)

Commits

Updates ruff from 0.16.10 to 0.17.3

Release notes

Sourced from ruff's releases.

0.17.3

Release Notes

Released on 2026-10-26.

Preview features

  • [suspicious] Add shared-clock-mock (#29074)

Bug fixes

  • [pyupgrade] Avoid incorrect conversions to f-strings (UP032) (#25485)

Performance

  • Buffer stdout in ruff format (#29631)
  • Specialize ASCII identifier lexing (#29503)
  • Speed up identifier and keyword lexing (#29463)

Documentation

  • [flake8-bandit] Describe what the rule actually checks for httpx (S113) (#27936)

Contributors

Install ruff 0.17.3

Install prebuilt binaries via shell script

curl --proto '=https' --tlsv1.2 -LsSf https://releases.astral.sh/github/ruff/releases/download/0.17.3/ruff-installer.sh | sh

Install prebuilt binaries via powershell script

powershell -ExecutionPolicy Bypass -c "irm https://releases.astral.sh/github/ruff/releases/download/0.17.3/ruff-installer.ps1 | iex"

Download ruff 0.17.3

File Platform Checksum
ruff-aarch64-apple-darwin.tar.gz Apple Silicon macOS checksum
ruff-x86_64-apple-darwin.tar.gz Intel macOS checksum
ruff-aarch64-pc-windows-msvc.zip ARM64 Windows checksum

... (truncated)

Changelog

Sourced from ruff's changelog.

0.17.3

Released on 2026-10-26.

Preview features

  • [suspicious] Add shared-clock-mock (#29074)

Bug fixes

  • [pyupgrade] Avoid incorrect conversions to f-strings (UP032) (#25485)

Performance

  • Buffer stdout in ruff format (#29631)
  • Specialize ASCII identifier lexing (#29503)
  • Speed up identifier and keyword lexing (#29463)

Documentation

  • [flake8-bandit] Describe what the rule actually checks for httpx (S113) (#27936)

Contributors

0.17.2

Released on 2026-10-22.

Preview features

  • [complexity] Add unnecessary-regular-expression-compile (#25533)

Bug fixes

  • Avoid syntax errors for type variables with starred constraints (UP040, UP046, UP047, RUF053) (#28362)
  • [pydocstyle] Treat backslash-escaped *args and **kwargs as documented (D417) (#29536)
  • [pylint] Avoid false positive on starred elements (PLE0643) (#29483)
  • [pylint] Mark fixes unsafe when deleting comments (PLR5501, PLW0120) (#29414)
  • [pyupgrade] Mark fix unsafe when deleting comments (UP035) (#29413)

Performance

  • Avoid intermediate names in lint name resolution (#29506)
  • Prefilter bidirectional Unicode checks by UTF-8 leading bytes (#29561)
  • Share postfix parsing and reduce expression copies (#29480)

... (truncated)

Commits

Updates ty from 0.0.84 to 0.0.95

Release notes

Sourced from ty's releases.

0.0.95

Release Notes

Released on 2026-10-29.

Bug fixes

  • Accept another unpacked TypeVarTuple as a default (#29752)
  • Accept keyword arguments for TypeAliasType name and value (#29802)
  • Detect traversal budget exhaustion in products of lower bounds (#29679)
  • Fix recursive protocol materialization self-comparison (#29809)
  • Reject out-of-scope type variables in PEP 695 pack defaults (#29805)
  • Use a trailing ParamSpec default after a TypeVarTuple (#29755)

LSP server

  • Parenthesize assignment and generator expressions in argument hint edits (#29797)
  • Place argument name inlay hints before grouping parentheses (#29794)
  • Place variable type inlay hints after grouping parentheses (#29795)

Contributors

Install ty 0.0.95

Install prebuilt binaries via shell script

curl --proto '=https' --tlsv1.2 -LsSf https://releases.astral.sh/github/ty/releases/download/0.0.95/ty-installer.sh | sh

Install prebuilt binaries via powershell script

powershell -ExecutionPolicy Bypass -c "irm https://releases.astral.sh/github/ty/releases/download/0.0.95/ty-installer.ps1 | iex"

Download ty 0.0.95

File Platform Checksum
ty-aarch64-apple-darwin.tar.gz Apple Silicon macOS checksum
ty-x86_64-apple-darwin.tar.gz Intel macOS checksum
ty-aarch64-pc-windows-msvc.zip ARM64 Windows checksum
ty-i686-pc-windows-msvc.zip x86 Windows checksum
ty-x86_64-pc-windows-msvc.zip x64 Windows checksum
ty-aarch64-unknown-linux-gnu.tar.gz ARM64 Linux checksum

... (truncated)

Changelog

Sourced from ty's changelog.

0.0.95

Released on 2026-10-29.

Bug fixes

  • Accept another unpacked TypeVarTuple as a default (#29752)
  • Accept keyword arguments for TypeAliasType name and value (#29802)
  • Detect traversal budget exhaustion in products of lower bounds (#29679)
  • Fix recursive protocol materialization self-comparison (#29809)
  • Reject out-of-scope type variables in PEP 695 pack defaults (#29805)
  • Use a trailing ParamSpec default after a TypeVarTuple (#29755)

LSP server

  • Parenthesize assignment and generator expressions in argument hint edits (#29797)
  • Place argument name inlay hints before grouping parentheses (#29794)
  • Place variable type inlay hints after grouping parentheses (#29795)

Contributors

0.0.94

Released on 2026-10-28.

Bug fixes

  • Correctly handle line continuation when fixing unused ignore comments (#29781)
  • Fix Linux x86-64 startup on older kernels (#4853)
  • Fix a panic when a comprehension filter depends on a later binding (#29786)
  • Fix a panic when sorting diagnostics without a source location (#29780)
  • Fix panic on a chained assignment with a missing value (#29787)
  • Reject defaulted TypeVars after a TypeVarTuple in legacy generic classes (#29753)

Other changes

  • Django: suppress invalid-override errors for Meta configurations (#29769)

Contributors

0.0.93

... (truncated)

Commits

Updates pandas-stubs from 3.0.5.260914 to 3.1.0.261029

Commits
  • 2a4a9c1 Version 3.1.0.261029
  • 9490b69 BLD: update to pandas 3.1.0 and adapt stubs and tests (#2036)
  • 0bdb355 TYP: reject complex ordering for Series and Index (#2016)
  • fadb447 TYP: drop the unreachable Series.rmatmul(DataFrame) and document operator...
  • f72cd2a TYP: Remove mode property from BaseBuffer protocol #1956 (#2041)
  • 9dccbf5 DOC: require public API status before adding stubs (#2039)
  • e201493 TST: use canonical IANA time zones in tests (#2033)
  • 8dd6d91 TST: 🌙 fix nightly dtype warnings and Index.where test data (#2028)
  • 36a22a8 TYP: Include missing values in scalar indexer returns (#1946)
  • 1026204 TYP: accept list bounds in DataFrame.clip (#2022)
  • Additional commits viewable in compare view

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…th 8 updates

Bumps the python-dependencies group with 8 updates in the / directory:

| Package | From | To |
| --- | --- | --- |
| [numpy](https://github.com/numpy/numpy) | `2.5.3` | `2.5.4` |
| [pandas](https://github.com/pandas-dev/pandas) | `3.0.6` | `3.1.0` |
| [pyarrow](https://github.com/apache/arrow) | `25.0.1` | `26.0.0` |
| [pytest](https://github.com/pytest-dev/pytest) | `9.1.1` | `9.2.0` |
| [mypy](https://github.com/python/mypy) | `2.4.0` | `2.4.1` |
| [ruff](https://github.com/astral-sh/ruff) | `0.16.10` | `0.17.3` |
| [ty](https://github.com/astral-sh/ty) | `0.0.84` | `0.0.95` |
| [pandas-stubs](https://github.com/pandas-dev/pandas-stubs) | `3.0.5.260914` | `3.1.0.261029` |



Updates `numpy` from 2.5.3 to 2.5.4
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst)
- [Commits](numpy/numpy@v2.5.3...v2.5.4)

Updates `pandas` from 3.0.6 to 3.1.0
- [Release notes](https://github.com/pandas-dev/pandas/releases)
- [Commits](pandas-dev/pandas@v3.0.6...v3.1.0)

Updates `pyarrow` from 25.0.1 to 26.0.0
- [Release notes](https://github.com/apache/arrow/releases)
- [Commits](apache/arrow@apache-arrow-25.0.1...apache-arrow-26.0.0)

Updates `pytest` from 9.1.1 to 9.2.0
- [Release notes](https://github.com/pytest-dev/pytest/releases)
- [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst)
- [Commits](pytest-dev/pytest@9.1.1...9.2.0)

Updates `mypy` from 2.4.0 to 2.4.1
- [Changelog](https://github.com/python/mypy/blob/master/CHANGELOG.md)
- [Commits](python/mypy@v2.4.0...v2.4.1)

Updates `ruff` from 0.16.10 to 0.17.3
- [Release notes](https://github.com/astral-sh/ruff/releases)
- [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md)
- [Commits](astral-sh/ruff@0.16.10...0.17.3)

Updates `ty` from 0.0.84 to 0.0.95
- [Release notes](https://github.com/astral-sh/ty/releases)
- [Changelog](https://github.com/astral-sh/ty/blob/main/CHANGELOG.md)
- [Commits](astral-sh/ty@0.0.84...0.0.95)

Updates `pandas-stubs` from 3.0.5.260914 to 3.1.0.261029
- [Changelog](https://github.com/pandas-dev/pandas-stubs/blob/main/docs/release_procedure.md)
- [Commits](pandas-dev/pandas-stubs@v3.0.5.260914...v3.1.0.261029)

---
updated-dependencies:
- dependency-name: numpy
  dependency-version: 2.5.4
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: pandas
  dependency-version: 3.1.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: python-dependencies
- dependency-name: pyarrow
  dependency-version: 26.0.0
  dependency-type: direct:production
  update-type: version-update:semver-major
  dependency-group: python-dependencies
- dependency-name: pytest
  dependency-version: 9.2.0
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: python-dependencies
- dependency-name: mypy
  dependency-version: 2.4.1
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: ruff
  dependency-version: 0.17.3
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: python-dependencies
- dependency-name: ty
  dependency-version: 0.0.95
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: pandas-stubs
  dependency-version: 3.1.0.261029
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: python-dependencies
...

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