cortex: autolens_inference 2026-10-19 — sparse legs cancelled (human), flat layout, wave-1 attempt 1 set aside

[Jammy2211]

Summary

This PR updates the projects/autolens_inference.md ledger for the 2026-10-19 clean-up of campaign hst-imaging-mass-samplers. Every write went through a scripts/cortex.py verb. It is stacked on #72 (insight/hst-cleanslate-20261018).

Runs moved into the Log with done:

• 412539: finished. COMPLETED per sacct; 412539_0 ended 2026-10-18T23:46:01 and 412539_1 ended 2026-10-18T20:43:11.
• 412541: written with --failed --wall 47:04. The note says it was CANCELLED by scancel ~15:51Z on the human's decision and is not a run failure. The verb set has no cancelled state, so --failed plus the note is the closest available record. The note also lists the stages complete at cancel.
• 412565: written with --failed --wall 44:52, with the same kind of cancellation note and stage list.

New Log note (newest first) records:

• the human's verbatim decisions;
• the merge of autolens_inference#36 (c3ca4de) and the flatten --apply on RAL and the laptop;
• the flat layout paths;
• the aside locations for the wave-1 attempt-1 material;
• keeping prepared/, recorded as a proposal pending the human's confirmation.

Now is rewritten: nothing is queued, and every next step needs the human's go.

Unchanged:

• 412543 (wave 1 attempt 1) stays under Runs as running. Its final sacct state was not read in this session.
• projects.yaml names no cleanslate_2026_10_17 path, so it is untouched.

cortex.py check: OK. pytest: 65 passed. Dashboard rendered with --cortex <worktree>, and dashboard --check reports it current. No compute was submitted.

🤖 Generated with Claude Code