Issues

• convert to cwl: output-prefix support

  WorkflowConversion/CTDConverter#61 · Filter by author mr-c opened on Mar 15, 2021

• gather workflows for end-to-end testing

  WorkflowConversion/CTDConverter#55 · Filter by author mr-c opened on Jan 25, 2021
  6

• Add unit tests for CWL

  WorkflowConversion/CTDConverter#48 · Filter by author Tomnl opened on Jul 5, 2019
  4

• Flags get not properly translated into cwl

  WorkflowConversion/CTDConverter#43 · Filter by author mwalzer opened on Dec 6, 2018
  4

• cwl conversion adds version parameter even if the tool does not have a version parameter

  WorkflowConversion/CTDConverter#42 · Filter by author mwalzer opened on Dec 6, 2018

• defaults render cwl invalid

  WorkflowConversion/CTDConverter#41 · Filter by author mwalzer opened on Dec 6, 2018
  1

• LICENSE says GPL-3, convert.py says Apache-2.0; which is it? :-)

  WorkflowConversion/CTDConverter#39 · Filter by author mr-c opened on Feb 18, 2018
  1

• CWL: \n is not valid YAML, nor do URLs need wrapping in <>

  WorkflowConversion/CTDConverter#37 · Filter by author mr-c opened on Feb 17, 2018

• cwl always needs an output section, even if empty

  WorkflowConversion/CTDConverter#36 · Filter by author mr-c opened on Feb 10, 2018

• Unable to parse CTD from Seqan 2.4.0

  WorkflowConversion/CTDConverter#35 · Filter by author mr-c opened on Feb 10, 2018
  2

• Add support for the <citations> element in Galaxy.

  WorkflowConversion/CTDConverter#33 · Filter by author chahuistle opened on Oct 20, 2017
  5

• add NoFlo support

  WorkflowConversion/CTDConverter#32 · Filter by author jibe-b opened on Oct 10, 2017

• Positional parameters in generated files

  WorkflowConversion/CTDConverter#31 · Filter by author chahuistle opened on Aug 29, 2017
  5

• Use Python's provided logging module

  enhancement
  WorkflowConversion/CTDConverter#29 · Filter by author chahuistle opened on Aug 15, 2017

• Add CWL support

  enhancement
  WorkflowConversion/CTDConverter#28 · Filter by author chahuistle opened on Aug 11, 2017
  1

• Documentation: Add some example CTDs

  enhancement
  WorkflowConversion/CTDConverter#15 · Filter by author sneumann opened on May 19, 2016
  1

• Generate ToolConfigs with attributes in alphabetical order

  WorkflowConversion/CTDConverter#12 · Filter by author chahuistle opened on Nov 13, 2015
  1