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  1. brien_bracken_phillips_paper brien_bracken_phillips_paper Public

    Bioinformatics pipeline for the DepMap and RNA-seq data analysis performed for the following paper published at Molecular Cell: "A specific form of cPRC1 containing CBX4 is co-opted to mediate onco…

    HTML

  2. crispr_screen_pipeline crispr_screen_pipeline Public

    A python-driven pooled CRISPR-screen analysis pipeline developed at the Phillips Lab (University of Pennsylvania) tailored to batch execution at a HPC environment.

    Python

  3. cut_and_run_pipeline cut_and_run_pipeline Public

    A python-driven CUT&RUN pipeline analysis developed at the Phillips Lab (University of Pennsylvania) tailored to batch execution at a HPC environment.

    R

  4. rnaseq_pipeline rnaseq_pipeline Public

    A python-driven RNA-seq analysis pipeline developed at the Phillips Lab (University of Pennsylvania) tailored to batch execution at a HPC environment.

    Python

  5. html-editor-enhanced html-editor-enhanced Public

    Edit HTML files visually in Obsidian (WYSIWYG) and save directly back to the selected vault file.

    HTML