ApT

For statistical analyses of aptamere sequences. So far, basic functionality with read in of data, lasso analysis of predictive properties of sequences for binding rates.

Name		Name	Last commit message	Last commit date
README.md		README.md
aptCalcStringDistance.m		aptCalcStringDistance.m
aptCompareFitVsTrue.m		aptCompareFitVsTrue.m
aptGenerateValiSequence.m		aptGenerateValiSequence.m
aptGetCVIndices.m		aptGetCVIndices.m
aptIncludeCertainPosFeatures.m		aptIncludeCertainPosFeatures.m
aptIncludeDataPredictors.m		aptIncludeDataPredictors.m
aptIncludeExperimentalConditions.m		aptIncludeExperimentalConditions.m
aptIncludePredCodons.m		aptIncludePredCodons.m
aptIncludePredDimers.m		aptIncludePredDimers.m
aptIncludePredInteractionTerms.m		aptIncludePredInteractionTerms.m
aptIncludePredLength.m		aptIncludePredLength.m
aptIncludePredLengthTail.m		aptIncludePredLengthTail.m
aptIncludePredNMers.m		aptIncludePredNMers.m
aptIncludePredSingles.m		aptIncludePredSingles.m
aptIncludeRegExp.m		aptIncludeRegExp.m
aptIncludeSimplifiedSequence.m		aptIncludeSimplifiedSequence.m
aptIncludeSymmetry.m		aptIncludeSymmetry.m
aptInit.m		aptInit.m
aptLassoPlot.m		aptLassoPlot.m
aptLassoRegression.m		aptLassoRegression.m
aptLoocv.m		aptLoocv.m
aptPlotDataHists.m		aptPlotDataHists.m
aptPlotYs.m		aptPlotYs.m
aptPredictors.m		aptPredictors.m
aptPreprocessData.m		aptPreprocessData.m
aptRankPredictors.m		aptRankPredictors.m
aptReadCSVHeaderFile.m		aptReadCSVHeaderFile.m
aptReadSequenceData.m		aptReadSequenceData.m
aptRefinePredictors.m		aptRefinePredictors.m
aptSave.m		aptSave.m
aptSetPredsFullAnalysis.m		aptSetPredsFullAnalysis.m
aptSetPredsMutation_Spacer.m		aptSetPredsMutation_Spacer.m
aptValiBestPerformer.m		aptValiBestPerformer.m
aptValidation.m		aptValidation.m
aptWriteResults.m		aptWriteResults.m

Navigation Menu

Repository files navigation

ApT

About

Releases

Packages

Contributors

Languages

Latest commit

History

Folders and files

Repository files navigation

ApT

About

Resources

Stars

Watchers

Forks

Releases

Packages

Contributors

Languages