docs: add marker shapes tutorial - #23
Merged
Merged
Conversation
New tutorials/marker_shapes.ipynb documenting render_shapes(shape=) for circle elements: - circle (default), hex, and square markers on blobs_circles - shape='visium_hex' rendering real Visium spots as a touching hex grid (squidpy visium_hne_sdata, coloured by brain-region clusters) - composing shape= with colour and outline Executed against spatialdata-plot v0.4.1; committed with outputs. Adds the gallery card + toctree + thumbnail.
|
Check out this pull request on See visual diffs & provide feedback on Jupyter Notebooks. Powered by ReviewNB |
|
📖 Docs preview: https://scverse.org/spatialdata-plot-tutorials/pr-23/gallery.html Built from 16ca5f2; redeployed on every push. |
…, substitute-your-names guidance
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
1 participant
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Summary
Adds
tutorials/marker_shapes.ipynbdocumentingrender_shapes(shape=)— the marker override for circle elements (previously undocumented).Covers:
circle(default),hex, andsquaremarkers onblobs_circlesshape="visium_hex"rendering real 10x Visium spots as a touching hex grid (squidpy.datasets.visium_hne_sdata(), coloured by brain-region clusters) — the familiar Visium lookshape=with colour and outlineExecuted against spatialdata-plot v0.4.1, committed with outputs. Adds the gallery card + toctree + thumbnail.
Closes Group D (
shape=) from the round-2 doc-coverage analysis.