ecological-modelling

R package for community ecologists: popular ordination methods, ecological null models & diversity analysis

{mvgam} R 📦 to fit Dynamic Bayesian Generalized Additive Models for multivariate modeling and forecasting

An ecologically inspired multi-agent system. Agents are designed with neural network based decision making, and complex resource requirements.

Ecological forecasting using Dynamic Generalized Additive Models with R 📦's {mvgam} and {brms}

Simulation of multiple ecological functional corridors

Landscape Ecosystem Modelling in R

Applied Time Series Analysis - course website repository.

Development version of phaseR, an R package for phase plane analysis of one- and two-dimensional autonomous ODE systems

Documents, Data, and Code. The NCX Methodology For Improved Forest Management (IFM) Through Short-Term Harvest Deferral.

An R package for simulating Generalised Management Strategy Evaluation

material for a review on capture-recapture methods and questions

A Python based kernel to perform spatial (environmental) impact assessment

Explicit Interaction Community Models

A comprehensive computational biophysics simulation suite consisting of various ecological interactions between microorganisms of different characteristics in varying environments. We plan to expand this into a complete biophysics education interface for anyone interested in an interdisciplinary approach to simulations in ecological sciences.

Ecology modelling - 3 species LV model

Extrapolation assessments in density surface models

CoralBlox is a coral growth and mortality ecological model, developed for decision support, that iterates over discretized distributions.

R package for bootstrapping indices of bipartite ecological networks

A simple model for simulation of fire spread in savannas and other grass-dominated ecosystems.