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@wanglab-broad

Wang Lab @ MIT and Broad Institute

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  1. ClusterMap ClusterMap Public

    ClusterMap for multi-scale clustering analysis of spatial gene expression

    Jupyter Notebook 46 13

  2. spin spin Public

    SPatial INtegration of spatially resolved transcriptomics datasets

    Jupyter Notebook 19

  3. CAST CAST Public

    CAST package

    Python 43 6

  4. starfinder starfinder Public

    Customized snakemake workflow for computational image processing

    Jupyter Notebook 5

  5. harmonics harmonics Public

    Harmonic analysis of spatial transcriptomics data

    Python 1

  6. FuseMap FuseMap Public

    Jupyter Notebook 3 5

Repositories

Showing 10 of 24 repositories
  • starfinder Public

    Customized snakemake workflow for computational image processing

    wanglab-broad/starfinder's past year of commit activity
    Jupyter Notebook 5 MIT 0 1 0 Updated Oct 19, 2026
  • probe-design Public
    wanglab-broad/probe-design's past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Oct 16, 2026
  • FuseMap Public
    wanglab-broad/FuseMap's past year of commit activity
    Jupyter Notebook 3 Apache-2.0 5 0 0 Updated Sep 14, 2026
  • motifome-portal Public
    wanglab-broad/motifome-portal's past year of commit activity
    JavaScript 0 0 0 0 Updated Sep 3, 2026
  • MIRTO Public
    wanglab-broad/MIRTO's past year of commit activity
    Python 0 0 0 0 Updated Aug 17, 2026
  • scz_analysis Public
    wanglab-broad/scz_analysis's past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated May 6, 2026
  • parna Public
    wanglab-broad/parna's past year of commit activity
    Python 1 1 0 0 Updated Mar 27, 2026
  • workshop25 Public

    2025 Wang Lab Computational Workshop

    wanglab-broad/workshop25's past year of commit activity
    Jupyter Notebook 3 MIT 0 0 0 Updated Dec 11, 2025
  • ClusterMap Public

    ClusterMap for multi-scale clustering analysis of spatial gene expression

    wanglab-broad/ClusterMap's past year of commit activity
    Jupyter Notebook 46 GPL-3.0 13 6 0 Updated Jun 13, 2025
  • amberti Public

    python package to run AmberTI

    wanglab-broad/amberti's past year of commit activity
    Python 6 2 0 0 Updated May 29, 2025
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